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Hi this is Mary from OpenHelix with this week's tip of the week
it gives a missed it someplace else fisher's hang back by a bucket plot to
unix dot com for additional details
or provide links to the resources i'm talking about today winks the
publications and so on such exotic blog open fields dot com
highlighted a highlight the importance of community g_m_ browsers
because we're seeing more and more sequence data coming out in the next
generation sequencing a rather we find ourselves in
is a lot of new important biology that can be explored in these organisms
we are missing visit itself we're learning more about evolution
relationships interesting biology and and more
and here's a case of that there's a publication in a china butterfly
generation
answered and this particular com hill hill connie's son genome sequence data
they were able to lemony relationships that were important to the species
itself species from central south america and they were able to access
some really interesting stuff
but in the addition to the publication that we've got here we need to know more
about this because these two national publication formats can provide some
interesting biology in some compelling examples
i'm putting the access to the actual sequence data is also crucial as well if
you want to explore it further you want to know compare your species of interest
and more ukrainian access to that permission and generally these groups
are now providing a community g_m_ browser
and in this case here's the example of the postman butterfly genome
project browser
sellers business but this is a species were talking about them in h paper here
and they provide you access to i'm sequencing uh... information you can
dome of the whole sequence or you can perform sequin searches here at their
site you can browse around that you know
and the other thing that's great about these community of either sex is they
often linked to the lab it's performance work so here you go to the real avalon
bryn mawr uh... about their work you might want this additional details that
are important for you on things that uh... are coming out so this transcript
data coming out soon that may appear on edging around the report appears in some
of the super browsers uh... and so it's important to access that kind of
information as well
so didn't k_g_o_ badges are really important resource now i'm going to show
you the example of that you know brother they've created here but you can access
other tools that are available too
so here we're loading up the installation that they've got of edgy
about so this is the champion projects you press here that's part of the gym on
project
and so they've created a president you can you say you can't click on a gene
here you can learn more about this gene you could uh... political data as well
you could of that community tracks
uh... and so in this case keeping or look at the tracks that are available in
asia limited set of tracks that are available but over time this can grow
because that lapd maybe adding new data
and that data might be available here before it becomes available in some of
the super predators so to really key to access these community tina browsers and
explore that's
another example of this the monarch genome i was published prior to this and
um... they also created a community present site as well
so his monarch base and again you can print sequence which as you can come up
kinds of um... useful information you can look at uh...
different aspects of the biology that they've found interesting as well and
there's also an opportunity here to press their gino so if you click click
here for browse genome you can look around at their installation of cheap
*** you can search and various ways but i'm gonna go just directly to the
sprouts the latest g_m_ assembly link here
and show you their installation of g brown's
so again
they've created a site where you could browse around you could learn more about
teens ventures safety click on this gene you could learn more about this gene you
can add up different tracks in this case there are are just not tracks are
available that might be useful oreo i'll go back to the browser
year so it's really important to access these data sets they company these
papers and learned how to interactive software
and is that these community sites for more
now if she has also end up in some of the big browsers for example uh... just
recently ensemble meta seller has included both of these genomes so in
uh... in mid-july release that they had here
uh... in included both the stock market on the spokesman butterfly gino
and that's great too because they have additional tools that might be useful
for you
on a quick on that uh... he'll connie's son gino
just to show you the examples so you can learn more from this landing page it
will link you to uh... the sources of information and so on
but you also have access here to the um...
tage totals are available from ensemble saw this click this gene sample entry
point
to show you that
but from here you can learn about the chaining get transcript information yet
com assembly information
and you can access other tools um... around the ensemble
resources as well for example you could perform of detail the custom queries
from the ensemble that assault by omar installation here
so it's important to know that not only are the on publications available for
you but v genome browsers are now available at its key to access into
details that are available for you
uh... from these genome browsing cites the community once and the big g_m_ as
well
so check those out
thanks very much for your time